CDS

Accession Number TCMCG057C02363
gbkey CDS
Protein Id XP_018438916.1
Location complement(join(11007744..11008679,11008752..11008961,11009144..11009453,11009529..11011285,11011361..11011429,11011519..11011644,11011750..11012139,11012220..11012541,11012626..11013059,11013128..11013532,11013620..11013863,11013964..11014104,11014190..11014370,11014495..11014828,11014916..11015159,11015249..11015441,11015552..11015865,11015938..11016015,11016090..11016267,11016357..11016560,11016689..11016868,11016961..11017067,11017183..11017256,11017355..11017433,11017802..11017846,11017947..11018104,11018217..11018348,11018452..11018520))
Gene LOC108811361
GeneID 108811361
Organism Raphanus sativus

Protein

Length 2637aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018583414.1
Definition PREDICTED: small subunit processome component 20 homolog [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACTCCAGCTGATTCTAGGGCTGTCAAGTCGCTCAACAACTCTGAGGGAACGAATAAATTTAAGTACAAGAGTCCCGGTGAGAAAATGGAAGACACTAAAACACAAGTCGTCAATGTCTTCAAGACCTTGGAGAAGGTCAAGGCTGAGCCTTCAGAGGGTTCCACCTTTCTCAAGGATCGCCTCGTAGAATTAAGGGAACTGGATATAGCAGAATATTTTATTTCATTCTATGAAAAGATGCTGCCTTTTGTTCAAACTCTTCCGTTGGTTATCTCTCAGAAAGAAATAATCTTCTCAACGCTTGTCTCTGAATTACACATGAAAGCAAGATTCTCTCTGGACGCCTTTCTCCGGTTGATTGATGCTTTATCCAGAGATCTCTTGGACAGCTTTATTCCCTTCCTTCCTCGGCTTGTTAACTCCTTAGTGACACTCCTGAAAAATGGTGCTCAGAAAGAGCCAGAGATTGTTAAGCAGATATTCGTATCTTGGTCGAACATAGTAAAGAACCTGCAGAAGTATCTCATATGCGACATCGAAGGTGTTCTCAGGGATACACTGGAGCTGAGGTACTACCCACAAGAATCTATCAACGAATTGATGTCACGTTCGATGGCACTTTTGTTGAGGACTGCACGGGATGAGCAACGCGAGATAGGGATCAAGAGGATCCTTTCTGAACTTGCTGACCCACTGAAAAAATGTGGAGGAGCTATTCTACTATATCATGTTATGATGAGGGATGCTTCTGGGAAAAGTCTCCATTCCAAAGCTGGGAAAGCTTTGAGTTTCTTGCTGAAAGATTCAACATTGTCCTCTTCTGTTGATTCTCCTCAGGGTTCTGGTAATACAGTAGAAGCTGTGAGTTCAGCTTTGCAAAGAATATGCGAGGCAACTAAAGCAGAAGAATTAACCGTTATGTGGGACTGCTTGTATAAAGAAACAAAGAGATCAATCAAAAACAAAAACTCAGCTCATTTGACCCGACTCTTGACACTGCTTACTTCAGCTGTTAGGGTTAGGAAAGGTCTCAAAGTTTATGATTACCGATATTTGGTTGGACTTGTGAGCCAGATTGTCTCAACTTTTATGGATTCCTCTGATATTCTCGGTAAATCTTTGGGACTGATGTTATGCACCCTTGACATACCCAGTGATGTCAATGAGCTGGAATCCATTGCTTCACAATGGACCCCCATTTTTTCCTTGAAGACTTCAAGTTTGCTGAGCTTCTTGCGGGGATTGCTAGAGAAGAAGGATAAATTAATAGTGCAAGCCTTTACCAGTAATATATTAAGTTCGATCAACAATATGATTACGGGGTCTTCGGAGGAGGTTATTCCTCTCTTACTATTATTGTGTGAGAAGCAGCAAGCAAGCCACGACAAGGTGGATAACGTATATGGATCATTTGAGAGTATTCAGGAGTTCTTAGAAGACAAGATTAAGAAGATTCAAACGAATATGGAGAATACAGGACTAGCTCATACTGATGAGTCTGAGTTGGCTATTGTTTGGGGAGCTGTCAATTGTTTTCCCTATTTCAAAGTGGATTCATCACTACTGATTCGCTTCAAGAATACTCTGAAACACAAGTTGGCAGCCTCAGTTGTGAACGCTTCTAGTTCTCAGGAACTGATGTGGCAGAGCTTACTTGGTGCTACTTTGAGGTCATGTCTCAAAATCAGTTCTACTGGAAGACTCATCCACAGTGATGTAGAGGAAGCTTTGTCTCTTGCTAAATGTTACAAGTCATGTGTACAAGTTCTGTCTCCTGTGGCCGATTATTTGGATTTTGTGTATAGACCTCTATTAGCTAACGATGGTAACTCTAAGCCATGTACAGAACTCCAAGCAAAAAATGCTGAAGATGCCTTTGACATATTTTCTGAAAATTTACGTCACCCCCATAAAGACGTCCGTGTTATGACTTTAAGGATCTTATGCCATTTTGAACCTTTGTCTCCTGACCCTTGTGTTGAAGAGCATCGTCCAATGAAGAAGAAGCTGAAAATTGAAGTGGTTCAAAAGTCTTCCTCTGAAACGAATGTTCTTCAGTTATTGAAAATAGTTGAAGAGCGTCATCACCCATTATCCACTGGAAATGAATTGGCAACAATACAAAATGATCTCTCTGCTGGCAGGATACATGATGCATATGTGCCGCTTGTATTCAATGGAATGATAGGTCTTTTTCATAGAAACAAGGAATCTACTGAAATATGGGAACCAGCATCTAAGTGTCTTGCTCTTCTTATGACGAAGCAAACGGGAGCAGTGTGGAATGATTTTGTTCATTATTTGGGCCAGTGCCAACTAAAACTTGAAGCACTCCACAGCCATGATGAGAATGAAAACTACAGCATTTCACAGAAGCATAGTGGTCTGATGGAGAGGTTTAATTCATTTCTCTTCCAGCCGTATAATGGTACACCTACTGCAGATGTAGCATCTCTGTTGCTAAAGACCTTACAGAAAGTTCCCAATGTTGCTCAGTCTCATGCCTCTGATATTCTCCCTCTGCTATTGAAATTTATGGGGTACAACACTGAAAATCCTATGAGGGTCGGATTATATGACGGTGGGGTTTGTAAAGGAGAGAAGTGGAAGGGGCTGCTTAAACAGTGGTTGACTTTGCTGAAGCTGATGAAGAACCCGAGGTCGTCACGTTTTAGTCAATTTGTAAACGACGTTTTGCAGTACAGGTTCTTGGATGATAATGATGCTGAAATACAAATGAGTGTCCTAGAGTGCCTTGTGTTGTGGAATGACTATTTACTCCCACACCGCCATCGTTTGGAGAATCTGATTAAACGTAAAAAACTGAAAGAAGAGCTCACGGCCTTCTCCAAGGACATTGAAGAAGCTCACAGATCTCATTTTGTTTCTCTTGTAATTAGAATACTTACTCCAAAAGTTAGGAGTTTGAAGGACTCAGCGTCGCGTAAGGGTACAAGTATCCGTAACAGAGAGGCAGTTCTTCGCCTTATTTCTCGGCTGGATGTTAATAAAATTTCCCTGTTCTTTGCATTGTTGATGAAGCCTTTGAACATCATATCAGATGAAGCAACGGACTTGTTTTGGAGCTCAGGCAAAAGCTCTCTGGATTATTTCCAAAAGTCCAAGTTCACGAAATATATTAACGTAGATGCTCTTTCTACCTTATCCTGGAAGATGAGATCTGGTTTTCTTCATGTCATCCAACACATACTCGAAGTCTTTGATGTATTCCGTGTCCGACCATTTCTAGGCTTTCTTATGGGATGTGTTGTCCGCCTATTGGCAAACAACGCTCCAACTATCAATGAAGAAAGTAATATTGATACAGAGATTGTCTCAACAAATCACGACCAGGCTGGCACTTCTTTAAATCAGTTTAAAAAGTTGAGATCCTTATGTCTGAGGATTATTGCTCATGTTCTTAAAAAGTACGAGGATTGTGAACTTGGCTCTGAGTTCTGGGACCTATTCTTTTCAGCGGTGAATCCGTTGATCAAGAGTTTTAAGCAGGAGGGTTCTAGCAGTAAGAAACCAAGCTCACTGTTCACATGCTTCCTGTCAATGAGTAAATGCCCCAATCTCGTCACCTTCTTATGTCGGGAAGAGTCTCTTGTTCCAGACATTTTCTCAGTTCTAACAGTCACCACAGCTTCAAACCATATAAAGTCCTCTGCCTTGAGTTTCATAAAGAATCTGCTGAGCCTTGAGAAAGACGATGTCTTAAATCCATACATAGACGCACTGATTAACAACTTACATTCTCTTTTCCGTGGAGATATTTTGAGAAGGAAATCATTCAAGTATCATGGAGAAGGAGAGATTAAGATTGTTAAACTGTTGTCGAAGCATATCAGAGATGAATCTCATGTTATGAAGTATTTGGACATCTTTCTGTCTTTCTTGGTTAAACGTGTGAAATTGTCTGCAGATATTCATCGTGAGGCTTTACTAGCCATTCAAGACATCACATCGTTGCTTGGGAGTGAGAGTACTAACAAAATCATAGATACAGTCTCTCATCTGCTTGTTGACGCTAAACCTAATGTCCGATTATGCATTTGTAACCTTCTTGAGTCTCTTGCAAAAGTCGACGTTTCTCTAGATCGAGTGGCGAAATGCATCAGCGATATGAATGCAACCTCACCCATGGAAGTTGATGACCTTGACTATGAAACAATAATGGACGCTTATGCGAAGATTGATGTGGATTTCTTTAACGAATCCTCGGAGCAGCACATGATGATCATTATCTCACAGAGTCTATACAACATAGCATCAAAAGAAGTTACCTTAAGGGATTGCGCATGTAACCTCTTATGCACTTTTATTGAATTTTCAGCCTCTATACTTGACCAAGAGGCCTCAGCTCACTCTGACATTGGTAAAGAGGTTTCAAAATCTGTTGCAAGCTGGACAGGCGATCGCGTGTTGTGGATTATGAATAAGTTTATTCTGAAACACATTGGCGATGCAGTAAACAAAGGAATCTCAAGTGGAAAGGGGGAGATTCTTTTGATACGCAAAATGGTGATGAGCCTTCCAGATTCCGGGAATCTTGCTGCCTTCAGACCTTTGTGCTCTGAAAACGATGACCTTGATTTCTTTAAAAACGTCTTTAACATTCAGGCACACCGTAGAGCAAATGCAGTTAAACGTTTTGCCAAAGAGATCAAAGATAGCATTGATCTGCCTGAGGGAGTTGTGAGAAAACTCTTGGTCTCAATCTTTTTCAACATGTTGCTTGATGGACAAGAAAGAAAAGCTCAAGATAGAAAAGGTGGAGTTAAAAAGGGTCAAAATAGTAAAGATGAAAATGTCTTTGGTGCATGCGTAGAAGCCCTTGCATCCCTGTCTGCTCATATGAGTTGGAACACGTACGACGCTCTACTGGATCGGTGTTTCCATGAGATGAAGAAGTCTACGGACAAGAGCAAGCGTCTGTTGAATCTCGTCTGCTTGATTTTGGACAAGTTTCATTTTGCAAAAGGTAGTGGTTACGCACAGGAGGGTCACGAGGTTTGCCTTGAGAAAACCTTGTACCCGAAGATACTGGAGCTGTTGGATTCTGAGTCTGATGGCCTTAATGTCAACGCCTATGTAGCTGCTGTGAAGGTTCTAAAGCTACTTCCCAAAGAGATAATGGACTCAAAAATAGATTCTTTAGTCTCTAAACTTTCCAATCTTTTGAGGAGCCCGATGGATAGCACACGTGAGAATGCCAGAAAGGCTCTGGCTACTTGTCTGAAGGAGCTTGGCCTGGAGAATTACTTGCAACTTGTCGTTAAGAAACTAGAAGGAGCTGAGGTGCATGTCCTGGGGTACACTGTCCACTACATGTTATCGAAGTGCCTGCCCAGTCCTACGGGGTGGAAGTTGGATCATTGTTTGGAAGATCTTCTTAATGTGGTGGAAGCCAATATCCGTGGAGATGTTGATGAACAGAAAGAGGATAAGAAAGATTCAGTGATGAGGAGGAGGAAGAAGAAGAAAATAGAAAACAGAAAAAGCAGGTCAGTTGACACTCTGAGATTGATTGCTGAAAATGTAACATTCAGAAGCCATGCATCCAAGTTACTTTCTCTGGTTACTAGGCAGCGGCGGCAGGGGCCTATGACTTCAAAGTTAAAATCAACACTTGAGGATATGTTAAAGCATATTGCAACTGGTTTTGAAGGCAATCCTTCTGTTGATCAAGGAGATCTTTTCTGTTTTATATATCACCGTGTTGACGACAACGAGAGTGGCCTTAGAGGTCCAGTGTCTTCTCAGCCATCCAAAAAGAAAAGGAAACTGAGACATATTGAAAACACTTGTGGTACAAAGTCATGTCCACATCTCATTACCGTGTTTGCTCTGGACTTATTGCGCAATAGACTGAAGAGAATCCAACCTAACAGTACTAACGAAGAGCTGGTGTCCAAGTTGGATCCGTTTGTCAAACTACTTGTTGGTTGTTTGAGCTCTGTGTATGAAGACGTTATATCTTCATCTATTAGATGTTTCACTGCATTGTTAAGGCTTCAACTGCCTTCCTTCAAGTCTGAAGCAGGTGAAGTGAAAACCAAAGTGTTAGCCATTGCCCAGTCTGCAGTGAGTTCCGGTAGTCCTCTTGTGCAGTCATGCCTTAGGCTGTTAACAGCTCTTGTCAGCAATGACAACTTCAAATTATCATCTGAGGAGTTGAAAATGTTGATTCAGTTCCCTATGTTTTCTGATCTGGAATCGGATTCCTCTGTTGCTTCTCTTTCACTTCTCAAGGCCATTGTGAAAAAGAAGCTTAAAGTTCCGAAGATATATGATATTGCCGACCAGGTTTCAAGGTTGATGATAACACATCAGGATGAATCAATCCGCAATATATGTGGAACAATACTGGTAGAGTTTTTGGTCAATTATGCACTTTCTGAGAAACGCCTAGAAGGACGTTTTCACTTTCTGTGGAAAAATCTGAGCTATGAACATCCAACTGGAAGAGAAGCAGTTCTTGACGTTCTTCAAAAGCTTATCGATAGATTCCCAAACCATAATCCCGGAAAGCAGTCAAGATCTTCTCTAGGCCACCAGTCAGTTCTTGACCAGCAGTCTCAAATCTTGTTTGTTGAGCTTGCTTGTCGTTTGGAAACAGAAAATGACAAAAAATTGCTGGCCAAGATAAGTGATGTGATCAAACTTCTCATAGGTTGCATGAGTAATTATAATTCCAATCTTGAGCTCTGTATCGGTTGGTATAAGCAGGAGAACTCACGGGTTAAAGCAGCAAAGGTATTGAAATTATTCATTGAAGTCAATAAAAAGTTTGAGTGCAGGACAGTGTTGCAAGAGGCTGAAACGATTTTGGAGGCTGCTGTGAAGTTGCAAAACACTGTTGAGGAAGGCAGTATTCCCTTATGGAAGGACGCATACTACTCTCTGGCTATGATAGAGAAGATGCTCGAGCACGATCCTGACTTATGTTTTCAAGAATATTTTAAGGGTGTTTGGATAATGGTGTTTGAGTTGTTGTTGCACCGACATGAGTGGTTGCAAACTATAACATGCCGGCTCCTGAACTATTATTTCAAGAAACTAACCGAGTCTACAGAAGCTGGCTCCCTTCTTGGTAAGCCAAGTAGCCTTTTCATGGTAGCTGCTTCTCTTTGCTTCCAGTTAAACCTAAAGGTGGACCGCAACACATTCGTCAACAAGAACAGTGATGCAAGTGCAAAAGAAGACAAGAAAAAAAATGGTGCCACTGAAGAAGATTATCTCACAGAGAATCTTGTTTTCGCAGTCACTGGTCTTCATTCAATGATTGGACAAACAGATGATGAGTACTGGTCAAGTCTTGACAATGACGAGCAAGCGAAGTTCCTAGAAGCCTTTCTAGTATTTGATTCAGGGAAAGTAAGGTCTACTTTTCTGGGCCTTACTAGTTCAGGCAACATGGAAGGCCAAGATGATGTTAGAAACGTATTGGTCGGAAGCTTGCTCAAAAGAATGGGGAAGCTTGCGTTTGATGTGGACTCTCATCAGATGAGGATAGTGTTCAACGTCTATAAAGAGTTTGCCTCAAACTTGAATCAAGAAGAGTGTCGCCTATACGCCTTCAGGATTCTGCTTCCGTTGTACAAAGTTTGCCAAGGGTTTACAGGGAAAGTCATCACAGATGAGTTGAAACAGCTAGCTGAAGAAGTGAGAGACTGTGTTAGGGACAAGGGTCTAGGCGTTCAGATGTTTGTGCAAGTCTACAGCGAAATAAAAAAGAGTTTGGAAGTGAAAAGGGAGAAGAGGAGGCGAGAAGAGAAGATCATGTCCGTGGTGAACCCTGAGAGAAACGCAAAGAGGAAACTGAAGTTAGCTTCGAAGAACAAGGCTAACAAGAAGAGGAGGATCATGAGGTGTAAAATGGATAGATGGTCACGCTCTTGA
Protein:  
MATPADSRAVKSLNNSEGTNKFKYKSPGEKMEDTKTQVVNVFKTLEKVKAEPSEGSTFLKDRLVELRELDIAEYFISFYEKMLPFVQTLPLVISQKEIIFSTLVSELHMKARFSLDAFLRLIDALSRDLLDSFIPFLPRLVNSLVTLLKNGAQKEPEIVKQIFVSWSNIVKNLQKYLICDIEGVLRDTLELRYYPQESINELMSRSMALLLRTARDEQREIGIKRILSELADPLKKCGGAILLYHVMMRDASGKSLHSKAGKALSFLLKDSTLSSSVDSPQGSGNTVEAVSSALQRICEATKAEELTVMWDCLYKETKRSIKNKNSAHLTRLLTLLTSAVRVRKGLKVYDYRYLVGLVSQIVSTFMDSSDILGKSLGLMLCTLDIPSDVNELESIASQWTPIFSLKTSSLLSFLRGLLEKKDKLIVQAFTSNILSSINNMITGSSEEVIPLLLLLCEKQQASHDKVDNVYGSFESIQEFLEDKIKKIQTNMENTGLAHTDESELAIVWGAVNCFPYFKVDSSLLIRFKNTLKHKLAASVVNASSSQELMWQSLLGATLRSCLKISSTGRLIHSDVEEALSLAKCYKSCVQVLSPVADYLDFVYRPLLANDGNSKPCTELQAKNAEDAFDIFSENLRHPHKDVRVMTLRILCHFEPLSPDPCVEEHRPMKKKLKIEVVQKSSSETNVLQLLKIVEERHHPLSTGNELATIQNDLSAGRIHDAYVPLVFNGMIGLFHRNKESTEIWEPASKCLALLMTKQTGAVWNDFVHYLGQCQLKLEALHSHDENENYSISQKHSGLMERFNSFLFQPYNGTPTADVASLLLKTLQKVPNVAQSHASDILPLLLKFMGYNTENPMRVGLYDGGVCKGEKWKGLLKQWLTLLKLMKNPRSSRFSQFVNDVLQYRFLDDNDAEIQMSVLECLVLWNDYLLPHRHRLENLIKRKKLKEELTAFSKDIEEAHRSHFVSLVIRILTPKVRSLKDSASRKGTSIRNREAVLRLISRLDVNKISLFFALLMKPLNIISDEATDLFWSSGKSSLDYFQKSKFTKYINVDALSTLSWKMRSGFLHVIQHILEVFDVFRVRPFLGFLMGCVVRLLANNAPTINEESNIDTEIVSTNHDQAGTSLNQFKKLRSLCLRIIAHVLKKYEDCELGSEFWDLFFSAVNPLIKSFKQEGSSSKKPSSLFTCFLSMSKCPNLVTFLCREESLVPDIFSVLTVTTASNHIKSSALSFIKNLLSLEKDDVLNPYIDALINNLHSLFRGDILRRKSFKYHGEGEIKIVKLLSKHIRDESHVMKYLDIFLSFLVKRVKLSADIHREALLAIQDITSLLGSESTNKIIDTVSHLLVDAKPNVRLCICNLLESLAKVDVSLDRVAKCISDMNATSPMEVDDLDYETIMDAYAKIDVDFFNESSEQHMMIIISQSLYNIASKEVTLRDCACNLLCTFIEFSASILDQEASAHSDIGKEVSKSVASWTGDRVLWIMNKFILKHIGDAVNKGISSGKGEILLIRKMVMSLPDSGNLAAFRPLCSENDDLDFFKNVFNIQAHRRANAVKRFAKEIKDSIDLPEGVVRKLLVSIFFNMLLDGQERKAQDRKGGVKKGQNSKDENVFGACVEALASLSAHMSWNTYDALLDRCFHEMKKSTDKSKRLLNLVCLILDKFHFAKGSGYAQEGHEVCLEKTLYPKILELLDSESDGLNVNAYVAAVKVLKLLPKEIMDSKIDSLVSKLSNLLRSPMDSTRENARKALATCLKELGLENYLQLVVKKLEGAEVHVLGYTVHYMLSKCLPSPTGWKLDHCLEDLLNVVEANIRGDVDEQKEDKKDSVMRRRKKKKIENRKSRSVDTLRLIAENVTFRSHASKLLSLVTRQRRQGPMTSKLKSTLEDMLKHIATGFEGNPSVDQGDLFCFIYHRVDDNESGLRGPVSSQPSKKKRKLRHIENTCGTKSCPHLITVFALDLLRNRLKRIQPNSTNEELVSKLDPFVKLLVGCLSSVYEDVISSSIRCFTALLRLQLPSFKSEAGEVKTKVLAIAQSAVSSGSPLVQSCLRLLTALVSNDNFKLSSEELKMLIQFPMFSDLESDSSVASLSLLKAIVKKKLKVPKIYDIADQVSRLMITHQDESIRNICGTILVEFLVNYALSEKRLEGRFHFLWKNLSYEHPTGREAVLDVLQKLIDRFPNHNPGKQSRSSLGHQSVLDQQSQILFVELACRLETENDKKLLAKISDVIKLLIGCMSNYNSNLELCIGWYKQENSRVKAAKVLKLFIEVNKKFECRTVLQEAETILEAAVKLQNTVEEGSIPLWKDAYYSLAMIEKMLEHDPDLCFQEYFKGVWIMVFELLLHRHEWLQTITCRLLNYYFKKLTESTEAGSLLGKPSSLFMVAASLCFQLNLKVDRNTFVNKNSDASAKEDKKKNGATEEDYLTENLVFAVTGLHSMIGQTDDEYWSSLDNDEQAKFLEAFLVFDSGKVRSTFLGLTSSGNMEGQDDVRNVLVGSLLKRMGKLAFDVDSHQMRIVFNVYKEFASNLNQEECRLYAFRILLPLYKVCQGFTGKVITDELKQLAEEVRDCVRDKGLGVQMFVQVYSEIKKSLEVKREKRRREEKIMSVVNPERNAKRKLKLASKNKANKKRRIMRCKMDRWSRS